Accession
MI0014535
Description
Arabidopsis lyrata
aly-MIR166d precursor miRNA
Gene family
MIPF0000004;
MIR166
Sequence
114
reads,
3975
reads per million, 1 experiments
gguugagaGGAAUGUUGUCUGGCUCGAGGucaugaagaagaucauuagauugauucaucuuaaagaaugaaaacccuaaaugauucUCGGACCAGGCUUCAUUCCCCccaacc
(((((.(.((((((..((((((.((((((((((..((....(((((((((......)))).....))))).....))..)))).)))))).))))))..)))))).).)))))
(((((.(.((((((..((((((.((((((((((..((....(((((((((......)))).....))))).....))..)))).)))))).))))))..)))))).).)))))
Structure
a a UU C - ga -aaga ----- ug
gguug g GGAAUG GUCUGG UCGAGG ucau ag ucauu agau a
||||| | |||||| |||||| |||||| |||| || ||||| ||||
ccaac C CCUUAC CGGACC GGCUcu agua uc aguaa ucua u
c C UU A u aa ccaaa gaaau cu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348718.1: 3632178-3632290 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR166d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR166d-5p
| Accession | MIMAT0017465 |
| Description | Arabidopsis lyrata aly-miR166d-5p mature miRNA |
| Sequence | 9 - GGAAUGUUGUCUGGCUCGAGG - 29 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR166d-3p
| Accession | MIMAT0017466 |
| Description | Arabidopsis lyrata aly-miR166d-3p mature miRNA |
| Sequence | 87 - UCGGACCAGGCUUCAUUCCCC - 107 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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