Accession
MI0014541
Description
Arabidopsis lyrata
aly-MIR167c precursor miRNA
Sequence
8358
reads,
1074.0
reads per million, 12 experiments
caguagcaguUAAGCUGCCAGCAUGAUCUUGUcuuccucucuuaaguuucauauauaaucaaguuaauauaaagauuuuguacaauucuuguucuuauuauaugaucauagcuuagagagagagagacUAGGUCAUGCUGGUAGUUUCACCugcuaaug
...((((((..((((((((((((((((((.(((((.((((((((((((((((((((((.((((....((((((...)))))).....))))...))).)))))))....))))).))))))).))))).))))))))))))))))))...))))))...
...((((((..((((((((((((((((((.(((((.((((((((((((((((((((((.((((....((((((...)))))).....))))...))).)))))))....))))).))))))).))))).))))))))))))))))))...))))))...
Structure
cag -uU U c - ---- - --u -uuaa g uagcag AAGCUGCCAGCAUGAUCU GUcuu cucucuu aaguu ucauaua uaa caag uauaaa |||||| |||||||||||||||||| ||||| ||||||| ||||| ||||||| ||| |||| |||||| a aucguC UUUGAUGGUCGUACUGGA cagag gagagag uucga aguauau auu guuc auguuu gua CAC U a a uacu u cuu uuaac u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348715.1: 1657189-1657347 [-]
Database links
Mature aly-miR167c-5p
| Accession | MIMAT0017477 |
| Description | Arabidopsis lyrata aly-miR167c-5p mature miRNA |
| Sequence | 11 - UAAGCUGCCAGCAUGAUCUUGU - 32 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR167c-3p
| Accession | MIMAT0017478 |
| Description | Arabidopsis lyrata aly-miR167c-3p mature miRNA |
| Sequence | 129 - UAGGUCAUGCUGGUAGUUUCACC - 151 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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