Accession
MI0014552
Description
Arabidopsis lyrata
aly-MIR169h precursor miRNA
Sequence
4
reads,
139
reads per million, 1 experiments
uagaaaaucauauaagagaaaauggugacaugaagaaugagaacuuguguggUAGCCAAGGAUGACUUGCCUGcguuuuaacaauacaauaucaaagacuacucgaucgaucgauagucuuagaguugguuagucgucaGGCAGUCUCCUUGGCUAUUcaaacaauucuuguucuccucauuucacaucucucuuucguuuuuug
((((((((.....((((((.....((((.((((((((((((((.((((.(((((((((((((.((((.(((((((..(((((....((((.((.(((((((.((((....))))))))))).))))))))))).)).))))))))))))))))))).))).))))))))))))))..)))).))))...))))))..))))))))
((((((((.....((((((.....((((.((((((((((((((.((((.(((((((((((((.((((.(((((((..(((((....((((.((.(((((((.((((....))))))))))).))))))))))).)).))))))))))))))))))).))).))))))))))))))..)))).))))...))))))..))))))))
Structure
cauau aaaug c -- c g - U U - uu aaua a a c u
uagaaaau aagaga guga auga agaaugagaa uugu ugg UAGCCAAGGA GACU GCCUG cg uuaac caau uc aagacua ucga c
|||||||| |||||| |||| |||| |||||||||| |||| ||| |||||||||| |||| ||||| || ||||| |||| || ||||||| ||||
guuuuuug uucucu cacu uacu ucuuguucuu aaca acU AUCGGUUCCU CUGA CGGac gc gauug guug ag uucugau agcu g
---cu --cua u cc - a U - - u -u ---- - a - a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348713.1: 8198473-8198677 [-]
Database links
Mature aly-miR169h-5p
| Accession | MIMAT0017499 |
| Description | Arabidopsis lyrata aly-miR169h-5p mature miRNA |
| Sequence | 53 - UAGCCAAGGAUGACUUGCCUG - 73 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR169h-3p
| Accession | MIMAT0017500 |
| Description | Arabidopsis lyrata aly-miR169h-3p mature miRNA |
| Sequence | 140 - GGCAGUCUCCUUGGCUAUU - 158 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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