Accession
MI0014559
Description
Arabidopsis lyrata
aly-MIR170 precursor miRNA
Sequence
3
reads,
105
reads per million, 1 experiments
cauucucucucuucgauucuuguuucucuugcaaaacagauacccucugucucugaguccgagagagucccucugaUAUUGGCCUGGUUCACUCAGAuucuccuaacuaacucaucUGAUUGAGCCGUGUCAAUAUCucaguccucucucgucgcuucucucauacuuuagagauuguuuuguuuuguacacacgaguuguuuguugauaug
.....((......((((((.(((......(((((((((((((..(((((....((((..((((((((...((..(((((((((.(((((((.((((((...............)))))).))))))).)))))))))..))..))))))))........)))).....)))))..)).))))))))))).))).))))))......))....
.....((......((((((.(((......(((((((((((((..(((((....((((..((((((((...((..(((((((((.(((((((.((((((...............)))))).))))))).)))))))))..))..))))))))........)))).....)))))..)).))))))))))).))).))))))......))....
Structure
cauuc ucucuu u uucucu - cc -ucuc ------uc ucc cu C C ucuccu
uc cgauuc ugu ugcaaaacaga ua cucug ugag cgagagag cu gaUAUUGGC UGGUUCA UCAGAu a
|| |||||| ||| ||||||||||| || ||||| |||| |||||||| || ||||||||| ||||||| |||||| a
ag guugag aca auguuuuguuu gu gagau acuc gcucucuc ga CUAUAACUG GCCGAGU AGUcua c
-guau uuguuu c -----c u ua uucau ucuucgcu -cu cu U U cucaau
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348720.1: 22899701-22899912 [+]
Database links
Mature aly-miR170-5p
| Accession | MIMAT0017513 |
| Description | Arabidopsis lyrata aly-miR170-5p mature miRNA |
| Sequence | 77 - UAUUGGCCUGGUUCACUCAGA - 97 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR170-3p
| Accession | MIMAT0017514 |
| Description | Arabidopsis lyrata aly-miR170-3p mature miRNA |
| Sequence | 117 - UGAUUGAGCCGUGUCAAUAUC - 137 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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