Accession
MI0014574
Description
Arabidopsis lyrata
aly-MIR394a precursor miRNA
Sequence
83984
reads,
2064.0
reads per million, 11 experiments
uagauuggaucuuuaaacuuuuguuccuuuucaugaggguuugacaaagaguuucuuacagacaucuUUGGCAUUCUGUCCACCUCCuccuguacauguguguauauauauguguuuuguguggaagAAGGAGGUGGGUAUACUGccaauagagaucuguuaggguuucuucguaaaacccucuugaucuauauacaacuuuaucaaugucuugaaucug
((((((((((..........((((......(((.((((((((.((.(((((.((((.(((((..(((((((((...((((((((((((.((..(((((((((....)))))))))..........)).))))))))))))...)))))).)))..))))).)))).))))).)).)))))))).))).......))))..........))))..))))))
((((((((((..........((((......(((.((((((((.((.(((((.((((.(((((..(((((((((...((((((((((((.((..(((((((((....)))))))))..........)).))))))))))))...)))))).)))..))))).)))).))))).)).)))))))).))).......))))..........))))..))))))
Structure
-- cuuuaaacuu -uccuuu u g a u u ca - UUC c --------gu u
uagauu ggau uugu uca gaggguuu ac aagag uucu acaga ucu UUGGCA UGUCCACCUCCu cu acaugugug a
|||||| |||| |||| ||| |||||||| || ||||| |||| ||||| ||| |||||| |||||||||||| || |||||||||
gucuaa ucug aaca agu cucccaaa ug uucuu ggga ugucu aga aaccGU AUGGGUGGAGGA ga uguguauau u
gu uaacuauuuc uauaucu u a c u u ag u CAU A agguguguuu a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348713.1: 8699173-8699392 [+]
Database links
Mature aly-miR394a-5p
| Accession | MIMAT0017543 |
| Description | Arabidopsis lyrata aly-miR394a-5p mature miRNA |
| Sequence | 68 - UUGGCAUUCUGUCCACCUCC - 87 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR394a-3p
| Accession | MIMAT0017544 |
| Description | Arabidopsis lyrata aly-miR394a-3p mature miRNA |
| Sequence | 128 - AAGGAGGUGGGUAUACUG - 145 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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