Accession
MI0014580
Description
Arabidopsis lyrata
aly-MIR395f precursor miRNA
Sequence
gucaaaugucuccuugaGUUCCCUUAAACGCUUUAUUGuucacacuuuguugucuaagaucaaucgaucgauucaaucaaucugacgaacaCUGAAGUGUUUGGGGGGACUCuaggugacauauggc
((((.(((((.(((.((((((((((((((((((((.(((((.((..((((((.....((((....))))....))).)))..))..))))).)))))))))))))))))))).))).))))).))))
((((.(((((.(((.((((((((((((((((((((.(((((.((..((((((.....((((....))))....))).)))..))..))))).)))))))))))))))))))).))).))))).))))
Structure
a u u U -a cu - ucuaa a
guca auguc ccu gaGUUCCCUUAAACGCUUUA UGuuc ca uug uug gauc a
|||| ||||| ||| |||||||||||||||||||| ||||| || ||| ||| ||||
cggu uacag gga CUCAGGGGGGUUUGUGAAGU acaag gu aac aac cuag u
a u u C ca cu u -uuag c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348714.1: 14002867-14002993 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from aly-MIR395f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR395f-5p
| Accession | MIMAT0017555 |
| Description | Arabidopsis lyrata aly-miR395f-5p mature miRNA |
| Sequence | 18 - GUUCCCUUAAACGCUUUAUUG - 38 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR395f-3p
| Accession | MIMAT0017556 |
| Description | Arabidopsis lyrata aly-miR395f-3p mature miRNA |
| Sequence | 92 - CUGAAGUGUUUGGGGGGACUC - 112 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
|
