Accession
MI0014596
Description
Arabidopsis lyrata
aly-MIR408 precursor miRNA
Sequence
aaagguuagauugguauugcaaugaaagaagugguaaugauagagagagaCAGGGAACAAGCAGAGCAUGGauugaguuuacuaaaacauuaaacgacucuguuuugucucuacccAUGCACUGCCUCUUCCCUGGCucccucuuuucucucucucucucucucucucccucucucuauuucuuucucuccuuucauuucaauggauuuuu
.........((((......))))(((((((((((....((.((((((((((((((((...((((.((((((...(((...((.((((((...........)))))))))))...)))))).))))...))))))).......................)))))))))...))...)))))))))))..(((............))).....
.........((((......))))(((((((((((....((.((((((((((((((((...((((.((((((...(((...((.((((((...........)))))))))))...)))))).))))...))))))).......................)))))))))...))...)))))))))))..(((............))).....
Structure
--aaagguuagauugguauugcaau uaau --u ----------------------- CAA A auu uuu u uuaa
gaaagaagugg ga agagagaga CAGGGAA GCAG GCAUGG gag ac aaaaca a
||||||||||| || ||||||||| ||||||| |||| |||||| ||| || |||||| c
cuuucuuuauc cu ucucucucu GUCCCUU CGUC CGUAcc cuc ug uuuugu g
uuuuuagguaacuuuacuuuccucu -ucu ccc cucucucucucuuuucucccuCG CUC A cau --- - cuca
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348716.1: 22869851-22870061 [+]
Database links
Mature aly-miR408-5p
| Accession | MIMAT0017587 |
| Description | Arabidopsis lyrata aly-miR408-5p mature miRNA |
| Sequence | 51 - CAGGGAACAAGCAGAGCAUGG - 71 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR408-3p
| Accession | MIMAT0017588 |
| Description | Arabidopsis lyrata aly-miR408-3p mature miRNA |
| Sequence | 117 - AUGCACUGCCUCUUCCCUGGC - 137 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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