Accession
MI0014606
Description
Arabidopsis lyrata
aly-MIR828 precursor miRNA
Sequence
2
reads,
70
reads per million, 1 experiments
cauggacaaagucacaaaagugauaaaaucuccuuccacuuucuaauguuUCUUGCUUAAAUGAGUAUUCCAuguaaaaaaugagucacucacucauauggguggguuggguugguuuucucuucaugAGAUGCUCAUUUGAGCAAGCAAugucugugaguggaacuauuuaguaucauguuaugaauuuugucuuuug
...(((((((((((.....((((((........((((((((.(..(((((.((((((((((((((((((.((((...(((((.((((((((((((....))))))))..)))).))))).....)))).)))))))))))))))))).)))))..).))))))))........))))))....)).)))))))))....
...(((((((((((.....((((((........((((((((.(..(((((.((((((((((((((((((.((((...(((((.((((((((((((....))))))))..)))).))))).....)))).)))))))))))))))))).)))))..).))))))))........))))))....)).)))))))))....
Structure
-cau - caaaa aaaucucc u ua U C --uaa g -- a
ggacaaagu ca gugaua uuccacuu c auguu CUUGCUUAAAUGAGUAUU CAug aaaau aguc acucacuc u
||||||||| || |||||| |||||||| | ||||| |||||||||||||||||| |||| ||||| |||| ||||||||
ucuguuuua gu uacuau aaggugag g uguAA GAACGAGUUUACUCGUAG guac uuuug uugg uggguggg a
guuu a -auug gauuuauc u uc C A uucuc g gu u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348719.1: 6065263-6065461 [-]
Database links
Mature aly-miR828-5p
| Accession | MIMAT0017609 |
| Description | Arabidopsis lyrata aly-miR828-5p mature miRNA |
| Sequence | 51 - UCUUGCUUAAAUGAGUAUUCCA - 72 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR828-3p
| Accession | MIMAT0017610 |
| Description | Arabidopsis lyrata aly-miR828-3p mature miRNA |
| Sequence | 129 - AGAUGCUCAUUUGAGCAAGCAA - 150 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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