Accession
MI0014610
Description
Arabidopsis lyrata
aly-MIR834 precursor miRNA
Sequence
uuacagcgacagccaaaaucACCACAGCUUCUGCUACGAACguguuaagccauccuuuugaccauugcugcaccacuauuacggccaucacaagaaaaucuaugcaaguggaaacagugauaguagcggcuggcuaaugacacguUGGUAGCAGUAGCGGUGGUAAugucgauagcguga
......(((((.........(((((.(((.(((((((.((((((((((((((..............(((((...((((((((..((((..(((((...))).))...)))).....)))))))).))))))))))..))))))))).))))))).))).)))))..))))).........
......(((((.........(((((.(((.(((((((.((((((((((((((..............(((((...((((((((..((((..(((((...))).))...)))).....)))))))).))))))))))..))))))))).))))))).))).)))))..))))).........
Structure
---uuacag gccaaaauc A U G -- uccuuuugaccauu acc ---gg -ca - a
cgaca ACCAC GCU CUGCUAC AACguguua agcca gcugc acuauuac ccau ca aga
||||| ||||| ||| ||||||| ||||||||| ||||| ||||| |||||||| |||| || ||| a
gcugu UGGUG CGA GACGAUG Uugcacagu ucggu cggcg ugauagug ggug gu ucu
agugcgaua -------AA G U G aa -------------- --a acaaa aac a a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348718.1: 3227917-3228096 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR834
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR834-5p
| Accession | MIMAT0017617 |
| Description | Arabidopsis lyrata aly-miR834-5p mature miRNA |
| Sequence | 21 - ACCACAGCUUCUGCUACGAAC - 41 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR834-3p
| Accession | MIMAT0017618 |
| Description | Arabidopsis lyrata aly-miR834-3p mature miRNA |
| Sequence | 146 - UGGUAGCAGUAGCGGUGGUAA - 166 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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