Accession
MI0014625
Description
Arabidopsis lyrata
aly-MIR859 precursor miRNA
Sequence
195656
reads,
2640.0
reads per million, 9 experiments
agucgccgauggauauagauagaugucgaaaucUCUCCGUUGUAAAAUCAAACAugaguaugaauuuaaccaugaagggauauuuuugauucguauacucaugUUUGAUUUUACAAUAGAUAGAuaucgacgccuaucucuuguuaaacagagugauu
.((((((....((((.((((((.((((((.((((.((.((((((((((((((((((((((((((((((.((......)).)).....)))))..))))))))))))))))))))))).)).)))).)))))).))))))..)))).....).))))).
.((((((....((((.((((((.((((((.((((.((.((((((((((((((((((((((((((((((.((......)).)).....)))))..))))))))))))))))))))))).)).)))).)))))).))))))..)))).....).))))).
Structure
a - -gaug -u a a C C -- ----- a au gucgc c gaua agauag ugucga aucU UC GUUGUAAAAUCAAACAugaguau gaauu ua cc g ||||| | |||| |||||| |||||| |||| || ||||||||||||||||||||||| ||||| || || uagug g uugu ucuauc gcagcu uAGA AG UAACAUUUUAGUUUguacucaua cuuag au gg a u a acaaa uc c a U A ug uuuuu a ga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348714.1: 3372640-3372797 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from aly-MIR859
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR859-5p
| Accession | MIMAT0017647 |
| Description | Arabidopsis lyrata aly-miR859-5p mature miRNA |
| Sequence | 34 - UCUCCGUUGUAAAAUCAAACA - 54 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR859-3p
| Accession | MIMAT0017648 |
| Description | Arabidopsis lyrata aly-miR859-3p mature miRNA |
| Sequence | 104 - UUUGAUUUUACAAUAGAUAGA - 124 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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