Accession
MI0014636
Description
Arabidopsis lyrata
aly-MIR399g precursor miRNA
Sequence
gaugaugcaugguuggauuacaGGGCAAAUACUCCAUUGGCAGAuaguuuucgcuacaucuauauuauuuguuauuauaugggugaaucaauguaugaaaaauacuuuacUGCCAAAGGAGAUUUGCCCCGcaauuuguuccaugcaaaagaacauc
.....(((((((.((((((.(.((((((((.((((.(((((((.((((....))))(((((((((.((.....)).))))))))).......((((.....))))....))))))).)))))))))))).).))))))..)))))))..........
.....(((((((.((((((.(.((((((((.((((.(((((((.((((....))))(((((((((.((.....)).))))))))).......((((.....))))....))))))).)))))))))))).).))))))..)))))))..........
Structure
-----gauga -u a a A A -----------Auaguuuucgcua u u
ugcaugg uggauu c GGGCAAAU CUCC UUGGCAG caucuauau au u
||||||| |||||| | |||||||| |||| ||||||| ||||||||| || g
acguacc guuuaa G CCCGUUUA GAGG AACCGUc guggguaua ua u
cuacaagaaa uu c C - A auuucauaaaaaguauguaacuaa u u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348713.1: 12882529-12882685 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from aly-MIR399g
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR399g-5p
| Accession | MIMAT0017669 |
| Description | Arabidopsis lyrata aly-miR399g-5p mature miRNA |
| Sequence | 23 - GGGCAAAUACUCCAUUGGCAGA - 44 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR399g-3p
| Accession | MIMAT0017670 |
| Description | Arabidopsis lyrata aly-miR399g-3p mature miRNA |
| Sequence | 111 - UGCCAAAGGAGAUUUGCCCCG - 131 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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