Accession
MI0014637
Description
Arabidopsis lyrata
aly-MIR399h precursor miRNA
Sequence
auuacaGGGCAAGAUCUCUAUUGGCAGGaaaccauuacuugaccuuugcaucucuuuaugcauugcuuuguagugaguucuUGCCAAAGGAGAUUUGCCCGGuaau
(((((.(((((.(((((((.((((((((((..((((((..((.(..(((((......)))))..).)).))))))..)))))))))).)))))))))))).)))))
(((((.(((((.(((((((.((((((((((..((((((..((.(..(((((......)))))..).)).))))))..)))))))))).)))))))))))).)))))
Structure
a A A ac uu c uu cu
auuac GGGCA GAUCUCU UUGGCAGGaa cauuac ga c ugcau c
||||| ||||| ||||||| |||||||||| |||||| || | |||||
uaauG CCCGU UUAGAGG AACCGUucuu gugaug uu g acgua u
G - A ga -u c uu uu
Annotation confidence
Low
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Genome context
GL348713.1: 12884715-12884820 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from aly-MIR399h
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR399h-5p
| Accession | MIMAT0017671 |
| Description | Arabidopsis lyrata aly-miR399h-5p mature miRNA |
| Sequence | 7 - GGGCAAGAUCUCUAUUGGCAGG - 28 |
| Evidence |
experimental
Illumina [1] |
Mature aly-miR399h-3p
| Accession | MIMAT0017672 |
| Description | Arabidopsis lyrata aly-miR399h-3p mature miRNA |
| Sequence | 82 - UGCCAAAGGAGAUUUGCCCGG - 102 |
| Evidence |
experimental
Illumina [1], Solid [2] |
References
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