Accession
MI0014651
Description
Arabidopsis lyrata
aly-MIR3435 precursor miRNA
Sequence
2579
reads,
247.0
reads per million, 11 experiments
auuuugaacauucauucuacugugaacagagcucaccaauucuugaacugauaacuauucuuugacuuggacugcugauuuuggcaUAAUUCUGUCAAUUCCCUCAUAGAuguaauguaaguugguuuggaguucaguaaagaagcagugacacuaaaugacgguuggaaugccagagauagucuaguuacauguuugaaggaAUUGACAGUAUUAUGCCAGACggcauuucaaguugaagaggaugaagagcucaaagauuggugaggccuguuuauggcgaugaaauuggccuacaaagu
((((((..((((((((...((((((((((..((((((((((.((((.((........((((((((((((((.(((((..(((((((((((.(((((((((((.(((.(.(((((((.........(((((.((((...........(((...)))............)))).))))).........))))))).).))).))))))))))).)))))))))))))))).)))))))))))))).......)).)))).))))))))))..)))))))))).))))))..)).....))))))
((((((..((((((((...((((((((((..((((((((((.((((.((........((((((((((((((.(((((..(((((((((((.(((((((((((.(((.(.(((((((.........(((((.((((...........(((...)))............)))).))))).........))))))).).))).))))))))))).)))))))))))))))).)))))))))))))).......)).)))).))))))))))..)))))))))).))))))..)).....))))))
Structure
---aa -- cua ag c a gauaacua c au U C U G guaaguugg a -aguaaagaagc g
auuuug ca uucauu cugugaacag cucaccaauu uuga cu uucuuugacuugga ugcug uuuggcaUAAU CUGUCAAUUCC UCA A Auguaau uuugg guuc agu
|||||| || |||||| |||||||||| |||||||||| |||| || |||||||||||||| ||||| ||||||||||| ||||||||||| ||| | ||||||| ||||| |||| ||| a
ugaaac gu aaguag gguauuuguc gagugguuag aacu ga gagaaguugaacuu acggC AGACCGUAUUA GACAGUUAagg agu u uacauug agacc uaag uca
auccg ua --c cg a c -gaaguag u -- U a u g aucugauag g guuggcaguaaa c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348715.1: 920893-921194 [-]
Database links
Mature aly-miR3435-5p
| Accession | MIMAT0017701 |
| Description | Arabidopsis lyrata aly-miR3435-5p mature miRNA |
| Sequence | 87 - UAAUUCUGUCAAUUCCCUCAUAGA - 110 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR3435-3p
| Accession | MIMAT0017702 |
| Description | Arabidopsis lyrata aly-miR3435-3p mature miRNA |
| Sequence | 204 - AUUGACAGUAUUAUGCCAGAC - 224 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
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References
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