Accession
MI0014661
Description
Arabidopsis lyrata
aly-MIR3445 precursor miRNA
Sequence
24762
reads,
9579.0
reads per million, 12 experiments
auggugguaaaauuugauaauugucaccgacgggugggucuuucucccuaucaagcgAACCAUCACCUUCCAAACCguucccuucuucuucgugugggagaguaguccuaaguagccaaaagaagaagaagggcacaacuccaagggUUUGGAAGGUGAUUGUUUGCuugauagugagaaagacccacccauuggugauaaugagaaagacgcagacau
...(((......(((....(((((((((((.(((((((((((((((.(((((((((((((.(((((((((((((((.((((((((((((((...(((((......)))))...........)))))))))))).........)).))))))))))))))).))))))))))))).))))))))))))))).)))))))))))...)))..)))......
...(((......(((....(((((((((((.(((((((((((((((.(((((((((((((.(((((((((((((((.((((((((((((((...(((((......)))))...........)))))))))))).........)).))))))))))))))).))))))))))))).))))))))))))))).)))))))))))...)))..)))......
Structure
---aug guaaaa gaua c c C g --------- --------gug ga
gug uuu auugucaccga gggugggucuuucuc cuaucaagcgAAC AUCACCUUCCAAACC uu cccuucuucuuc uggga g
||| ||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||||||| |||||
cgc aaa uaauagugguu cccacccagaaagag gauaguuCGUUUG UAGUGGAAGGUUUgg aa gggaagaagaag auccu u
uacaga ----ag -gag a u U g ccucaacac aaaaccgauga ga
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348713.1: 7706713-7706931 [-]
Database links
Mature aly-miR3445-5p
| Accession | MIMAT0017723 |
| Description | Arabidopsis lyrata aly-miR3445-5p mature miRNA |
| Sequence | 58 - AACCAUCACCUUCCAAACC - 76 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR3445-3p
| Accession | MIMAT0017726 |
| Description | Arabidopsis lyrata aly-miR3445-3p mature miRNA |
| Sequence | 148 - UUUGGAAGGUGAUUGUUUGC - 167 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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