Stem-loop cre-MIR1161b

Accession

MI0015964

Description

Chlamydomonas reinhardtii cre-MIR1161b precursor miRNA

Sequence

gccaggugacaccacacaccuacuggaguucucaacagcuaggugacaccacacaccUACUGGAGUUCUCAACAGCuagguuugguuuggu
(((((.....((((...(((((((((((..(((..(((.((((((........))))))))))))..)))..))).))))).)))))))))

Structure

     gugac    cac     -   --   uu   aa   c      aca 
gccag     acca   accua cug  gag  cuc  cag uaggug   c
|||||     ||||   ||||| |||  |||  |||  ||| ||||||    
ugguu     uggu   uggau GAC  CUC  GAG  GUC AUccac   c
     -----    --u     C   AA   UU   --   -      aca 

Annotation confidence Not enough data

Genome context

scaffold_60: 450945-451035 [+]

Mature cre-miR1161b

• Accession: MIMAT0018505
• Description: Chlamydomonas reinhardtii cre-miR1161b mature miRNA
• Sequence: 58 - UACUGGAGUUCUCAACAGC - 76
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129