Stem-loop asu-mir-36f

Accession

MI0018593

Description

Ascaris suum asu-mir-36f precursor miRNA

Sequence

cuggagcgugACAUGGAUUCAGCUAUCUGUGGAguagugccuucaaaacaaauucuUCACCGGGCUGCAAUCCUUGUCAcgccggucu
(((..((((((((.((((((((((....((((((.(((.............)))))))))..))))).))))).)))))))))))...

Structure

---   ga        U     -     AUCU      u   gccuu 
   cug  gcgugACA GGAUU CAGCU    GUGGAg agu     c
   |||  |||||||| ||||| |||||    |||||| |||     a
   ggc  cgcACUGU CCUAA GUCGG    CACUuc uua     a
ucu   --        U     C     --GC      -   aacaa 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-36f-5p

• Accession: MIMAT0021546
• Description: Ascaris suum asu-miR-36f-5p mature miRNA
• Sequence: 11 - ACAUGGAUUCAGCUAUCUGUGGA - 33
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36f-3p

• Accession: MIMAT0021547
• Description: Ascaris suum asu-miR-36f-3p mature miRNA
• Sequence: 57 - UCACCGGGCUGCAAUCCUUGUCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477