Accession
MI0021962
Description
Populus trichocarpa
ptc-MIR6421 precursor miRNA
Sequence
7402
reads,
122.0
reads per million, 9 experiments
ugaaauccAAGUGGACUUCCCUUACAAUCUacucuuucaguuucacagaagauccagauuagauuuuaaggcaaacaaauugaUAGAGCAGAUUGUAAGGGAAGcccacauggauuuca
(((((((((.((((.(((((((((((((((.((((.(((((((..(..((((((.......))))))..)......))))))).)))).))))))))))))))).)))).)))))))))
(((((((((.((((.(((((((((((((((.((((.(((((((..(..((((((.......))))))..)......))))))).)))).))))))))))))))).)))).)))))))))
Structure
A A a u ----ca ag ca
ugaaauccA GUGG CUUCCCUUACAAUCU cucu ucaguuu c aagauc g
||||||||| |||| ||||||||||||||| |||| ||||||| | |||||| a
acuuuaggu cacc GAAGGGAAUGUUAGA GAGA aguuaaa g uuuuag u
a c C U caaacg aa au
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
CM000337.2: 5198860-5198978 [-]
Database links
Mature ptc-miR6421-5p
| Accession | MIMAT0025180 |
| Description | Populus trichocarpa ptc-miR6421-5p mature miRNA |
| Sequence | 9 - AAGUGGACUUCCCUUACAAUCU - 30 |
| Evidence |
experimental
miRNAseq [1], Illumina [2] |
Mature ptc-miR6421-3p
| Accession | MIMAT0025181 |
| Description | Populus trichocarpa ptc-miR6421-3p mature miRNA |
| Sequence | 84 - UAGAGCAGAUUGUAAGGGAAG - 104 |
| Evidence |
experimental
miRNAseq [1], Illumina [2] |
References
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