Accession
MI0022004
Description
Populus trichocarpa
ptc-MIR6430 precursor miRNA
Sequence
91
reads,
2.0
reads per million, 9 experiments
ccaaucuuagcuucuuguuguuuagcuUGAUGAUUAAUUGACUGCAAAagcaacucucuucuuuuuuuaggagaggaguugccuuUGCAGUCAAGUAAUCAUCAAGcuaaauaccauaacugaggacugagguagaagg
...(((((((((((((((((((((((((((((((((.(((((((((((.(((((((((((((......)))))).))))))).))))))))))).))))))))))))))))))..))))..)))).)))))))......
...(((((((((((((((((((((((((((((((((.(((((((((((.(((((((((((((......)))))).))))))).))))))))))).))))))))))))))))))..))))..)))).)))))))......
Structure
---cca - -- -- A a - uu
aucuuag cuuc uugu uguuuagcuUGAUGAUUA UUGACUGCAAA gcaacuc ucuucu u
||||||| |||| |||| |||||||||||||||||| ||||||||||| ||||||| ||||||
uggaguc ggag aaua auaaaucGAACUACUAAU AACUGACGUuu cguugag agagga u
ggaaga a uc cc G c g uu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
CM000337.2: 34025493-34025631 [+]
Database links
Mature ptc-miR6430-5p
| Accession | MIMAT0025231 |
| Description | Populus trichocarpa ptc-miR6430-5p mature miRNA |
| Sequence | 28 - UGAUGAUUAAUUGACUGCAAA - 48 |
| Evidence |
experimental
miRNAseq [1], Illumina [2] |
Mature ptc-miR6430-3p
| Accession | MIMAT0055677 |
| Description | Populus trichocarpa ptc-miR6430-3p mature miRNA |
| Sequence | 86 - UGCAGUCAAGUAAUCAUCAAG - 106 |
| Evidence |
experimental
unknown |
References
|
