Stem-loop oni-mir-26b

Accession

MI0034600

Description

Oreochromis niloticus oni-mir-26b precursor miRNA

Literature search

3 open access papers mention oni-mir-26b
(5 sentences)

Sequence

32624146 reads, 23203.0 reads per million, 113 experiments

UUCAAGUAAUCCAGGAUAGGUUuguucagacaagcacagCCUAUUCCGGAUGACUUGGUUC
.((((((.((((.(((((((((((((......)))).))))))))).)))).))))))...

Structure

--U      A    A         -    ca 
   UCAAGU AUCC GGAUAGGUU uguu  g
   |||||| |||| ||||||||| ||||   
   GGUUCA UAGG CUUAUCCga acga  a
CUU      G    C         c    ac 

Annotation confidence High

Genome context

GL831181.1: 3429879-3429939 [+]

Mature oni-miR-26b-5p

• Accession: MIMAT0042691
• Description: Oreochromis niloticus oni-miR-26b-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGUU - 22
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-26b-3p

• Accession: MIMAT0059358
• Description: Oreochromis niloticus oni-miR-26b-3p mature miRNA
• Sequence: 40 - CCUAUUCCGGAUGACUUGGUUC - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774