Stem-loop oni-mir-128-2

Accession

MI0034613

Description

Oreochromis niloticus oni-mir-128-2 precursor miRNA

Sequence

18280520 reads, 12289.0 reads per million, 116 experiments

GGGGGCCGUUACACUGUCAGAgauguagucugagggucUCACAGUGAACCGGUCUCUUU
((((((((...((((((..(((((.(.......).)))))))))))...))))))))..

Structure

--        UUA      CA     g ag 
  GGGGGCCG   CACUGU  GAgau u  u
  ||||||||   ||||||  ||||| |  c
  UCUCUGGC   GUGACA  CUcug g  u
UU        CAA      --     g ag 

Annotation confidence High

Genome context

CM001464.1: 13745450-13745508 [+]

Mature oni-miR-128-2-5p

• Accession: MIMAT0059371
• Description: Oreochromis niloticus oni-miR-128-2-5p mature miRNA
• Sequence: 1 - GGGGGCCGUUACACUGUCAGA - 21
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-128-3p

• Accession: MIMAT0042702
• Description: Oreochromis niloticus oni-miR-128-3p mature miRNA
• Sequence: 39 - UCACAGUGAACCGGUCUCUUU - 59
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774