Stem-loop oni-mir-460

Accession

MI0034632

Description

Oreochromis niloticus oni-mir-460 precursor miRNA

Sequence

ccugcauuguacacacugugcguauaaaugucauaagCACAGCGCAUACAAUGUGGAUG
.((((((((((..(.((((((.(((.......))).)))))).)..))))))))))...

Structure

--c          ca a      g   aa 
   cugcauugua  c cugugc uau  a
   ||||||||||  | |||||| |||  u
   GGUGUAACAU  G GACACg aua  g
GUA          AC C      a   cu 

Annotation confidence Not enough data

Genome context

CM001461.1: 14143293-14143351 [-]

Mature oni-miR-460

• Accession: MIMAT0042717
• Description: Oreochromis niloticus oni-miR-460 mature miRNA
• Sequence: 38 - CACAGCGCAUACAAUGUGGAUG - 59
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774