Stem-loop oni-mir-734

Accession

MI0034736

Description

Oreochromis niloticus oni-mir-734 precursor miRNA

Sequence

501375 reads, 412.0 reads per million, 100 experiments

UGAACUAUUCUGCAACAUUUGUUGaugugguucugcaagUAAAUGCUGCAGAAUUGUGCUC
...((.((((((((.(((((((((...........))).)))))).)))))))).))....

Structure

-UGA  U        A      -   augu 
    AC AUUCUGCA CAUUUG UUG    g
    || |||||||| |||||| |||    g
    UG UAAGACGU GUAAAU aac    u
CUCG  U        C      g   gucu 

Annotation confidence High

Genome context

CM001459.1: 20928896-20928956 [+]

Mature oni-miR-734-5p

• Accession: MIMAT0059478
• Description: Oreochromis niloticus oni-miR-734-5p mature miRNA
• Sequence: 1 - UGAACUAUUCUGCAACAUUUGUUG - 24
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-734-3p

• Accession: MIMAT0042791
• Description: Oreochromis niloticus oni-miR-734-3p mature miRNA
• Sequence: 40 - UAAAUGCUGCAGAAUUGUGCUC - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774