Stem-loop oni-mir-723a

Accession

MI0034747

Description

Oreochromis niloticus oni-mir-723a precursor miRNA

Sequence

80771 reads, 84.0 reads per million, 74 experiments

cGGCAGCUUUGUGUGAUGUGACUUcugacauaucgaagaAGACAUCAGAUAAAUCUGUGCU
..((((.(((((.((((((..(((((..........))))))))))).))))).))))...

Structure

-cG    C     G      GA     gaca 
   GCAG UUUGU UGAUGU  CUUcu    u
   |||| ||||| ||||||  |||||     
   UGUC AAAUA ACUACA  GAaga    a
UCG    U     G      --     agcu 

Annotation confidence High

Genome context

CM001447.1: 24439668-24439728 [+]

Mature oni-miR-723a-5p

• Accession: MIMAT0059488
• Description: Oreochromis niloticus oni-miR-723a-5p mature miRNA
• Sequence: 2 - GGCAGCUUUGUGUGAUGUGACUU - 24
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-723a-3p

• Accession: MIMAT0042800
• Description: Oreochromis niloticus oni-miR-723a-3p mature miRNA
• Sequence: 40 - AGACAUCAGAUAAAUCUGUGCU - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774