miRBase entry: 22025521

Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa

PubMed ID 22025521
Authors "Yu X, Wang H, Lu Y, de Ruiter M, Cariaso M, Prins M, van Tunen A, He Y"
Journal "J Exp Bot
Volume 63
Pages 1025-1038

There are 51 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
bra-MIR1885a MI0008302 None chrA6 25298379 25298698 + -
bra-MIR5711 MI0019320 None chrA4 15753060 15753167 - -
bra-MIR5654a MI0019321 None chrA6 20504780 20504974 + -
bra-MIR5654b MI0019322 None None None -
bra-MIR5712 MI0019323 None chrA1 6456454 6456595 + -
bra-MIR5713 MI0019324 None chrA9 34116461 34116906 + -
bra-MIR5714 MI0019325 None chrA6 4279161 4279396 - -
bra-MIR5715 MI0019326 None chrA8 11797752 11797937 + -
bra-MIR5716 MI0019327 None chrA1 26758337 26758542 + -
bra-MIR5717 MI0019328 None chrA6 17555972 17556083 + -
bra-MIR1885b MI0019329 None None None -
bra-MIR5718 MI0019330 None chrA9 4446439 4446672 + -
bra-MIR5719 MI0019331 None chrA3 30606326 30606529 - -
bra-MIR5720 MI0019332 None chrA9 640193 640482 + -
bra-MIR5721 MI0019333 None chrA2 24366844 24367021 - -
bra-MIR5722 MI0019334 None chrA10 11342742 11342957 + -
bra-MIR1140 MI0019335 None chrA3 683631 683805 + -
bra-MIR5723 MI0019336 None chrA2 22331161 22331323 - -
bra-MIR5724 MI0019337 None chrA8 13793832 13794141 + -
bra-MIR5725 MI0019338 None chrA8 5349176 5349380 + -
bra-MIR5726 MI0019339 None chrA1 19127792 19128133 - -
ath-MIR156d MI0000181 None chr5 3456632 3456749 - High
ath-MIR824 MI0005409 None chr4 12625094 12625782 + High
ath-MIR156g MI0001082 None chr2 8412516 8412618 - High
ath-MIR156h MI0001083 None chr5 22597012 22597117 - High
ath-MIR156a MI0000178 None chr2 10676451 10676573 - High
ath-MIR408 MI0001080 None chr2 19319814 19320031 + Medium
bra-MIR398 MI0030566 None chrA3 2736128 2736251 + -
bra-MIR156d MI0030550 None chrA6 17880586 17880682 + -
bra-MIR5718 MI0019330 None chrA9 4446439 4446672 + -
bra-MIR5713 MI0019324 None chrA9 34116461 34116906 + -
bra-MIR824 MI0006439 None chrA3 25613141 25613772 + -
bra-MIR156g MI0030553 None chrA1 2836909 2837018 + -
bra-MIR156a MI0030547 None chrA2 2983764 2983891 + -
bra-MIR1885b MI0019329 None None None -
bra-MIR408 MI0029311 None chrA5 364768 364935 + -
tae-MIR398 MI0016466 8629 3B 662632381 662632500 + High
tae-MIR156 MI0016450 418 None None High
tae-MIR399 MI0006176 140 1A 229092696 229092821 - High
tae-MIR408 MI0006177 90 None None Low
aly-MIR156d MI0014505 8020 GL348718.1 4353135 4353252 - High
aly-MIR824 MI0014603 8159 GL348719.1 7604265 7604918 - High
aly-MIR156g MI0014508 174 GL348715.1 21084413 21084550 + High
aly-MIR156h MI0014509 105 GL348720.1 17184369 17184467 - High
aly-MIR156a MI0014502 6346 GL348716.1 3693766 3693949 - High
aly-MIR408 MI0014596 0 GL348716.1 22869851 22870061 + High
osa-MIR156d MI0000656 375099 2 4512884 4513012 - High
osa-MIR156g MI0000659 258296 9 15065253 15065368 + High
osa-MIR156h MI0000660 374943 8 21491232 21491417 + High
osa-MIR156a MI0000653 257272 1 22524147 22524246 - High
osa-MIR408 MI0001149 581 1 12301661 12301873 + High



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