Analysis of deep sequencing microRNA expression profile from human embryonic stem cells derived mesenchymal stem cells reveals possible role of let-7 microRNA family in downstream targeting of hepatic nuclear factor 4 alpha |
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PubMed ID | 20158877 |
Authors | Koh W, Sheng CT, Tan B, Lee QY, Kuznetsov V, Kiang LS, Tanavde V |
Journal | BMC Genomics |
Volume | 11 |
Pages | S6 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
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hsa-let-7a-1 | MI0000060 | 46519 | chr9 | 94175957 | 94176036 | + | High |
hsa-let-7a-2 | MI0000061 | 46265 | chr11 | 122146522 | 122146593 | - | High |
hsa-let-7a-3 | MI0000062 | 46706 | chr22 | 46112749 | 46112822 | + | High |
hsa-let-7c | MI0000064 | 15711 | chr21 | 16539828 | 16539911 | + | High |
hsa-let-7d | MI0000065 | 4366 | chr9 | 94178834 | 94178920 | + | High |
hsa-let-7e | MI0000066 | 5118 | chr19 | 51692786 | 51692864 | + | High |
hsa-let-7f-1 | MI0000067 | 65280 | chr9 | 94176347 | 94176433 | + | High |
hsa-let-7f-2 | MI0000068 | 65395 | chrX | 53557192 | 53557274 | - | High |
hsa-mir-21 | MI0000077 | 28570 | chr17 | 59841266 | 59841337 | + | High |
hsa-mir-22 | MI0000078 | 2726 | chr17 | 1713903 | 1713987 | - | High |
hsa-mir-24-1 | MI0000080 | 2988 | chr9 | 95086021 | 95086088 | + | High |
hsa-mir-24-2 | MI0000081 | 3119 | chr19 | 13836287 | 13836359 | - | High |
hsa-mir-29a | MI0000087 | 9609 | chr7 | 130876747 | 130876810 | - | High |
hsa-mir-100 | MI0000102 | 1446 | chr11 | 122152229 | 122152308 | - | High |
hsa-mir-103a-2 | MI0000108 | 15897 | chr20 | 3917494 | 3917571 | + | High |
hsa-mir-103a-1 | MI0000109 | 15862 | chr5 | 168560896 | 168560973 | - | High |
hsa-mir-199a-1 | MI0000242 | 10221 | chr19 | 10817426 | 10817496 | - | High |
hsa-mir-199a-2 | MI0000281 | 10210 | chr1 | 172144535 | 172144644 | - | High |
hsa-mir-221 | MI0000298 | 5088 | chrX | 45746157 | 45746266 | - | High |
hsa-let-7g | MI0000433 | 6904 | chr3 | 52268278 | 52268361 | - | High |
hsa-let-7i | MI0000434 | 7403 | chr12 | 62603686 | 62603769 | + | High |
hsa-mir-1-2 | MI0000437 | 5211 | chr18 | 21829004 | 21829088 | - | High |
hsa-mir-125b-1 | MI0000446 | 5007 | chr11 | 122099757 | 122099844 | - | High |
hsa-mir-143 | MI0000459 | 27646 | chr5 | 149428918 | 149429023 | + | High |
hsa-mir-152 | MI0000462 | 813 | chr17 | 48037161 | 48037247 | - | High |
hsa-mir-125b-2 | MI0000470 | 5102 | chr21 | 16590237 | 16590325 | + | High |
hsa-mir-185 | MI0000482 | 2631 | chr22 | 20033139 | 20033220 | + | High |
hsa-mir-320a | MI0000542 | 6059 | chr8 | 22244966 | 22245037 | - | High |
hsa-mir-1-1 | MI0000651 | 5442 | chr20 | 62554306 | 62554376 | + | High |
hsa-mir-423 | MI0001445 | 5810 | chr17 | 30117079 | 30117172 | + | High |
hsa-let-7b | MI0000063 | 27396 | chr22 | 46113686 | 46113768 | + | High |
hsa-mir-199b | MI0000282 | 9807 | chr9 | 128244721 | 128244830 | - | High |