The role of viral and host microRNAs in the Aujeszky's disease virus during the infection process |
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PubMed ID | 24475202 |
Authors | Timoneda O, Núñez-Hernández F, Balcells I, Muñoz M, Castelló A, Vera G, Pérez LJ, Egea R, Mir G, Córdoba S, Rosell R, Segalés J, Tomàs A, Sánchez A, Núñez JI |
Journal | PLoS One |
Volume | 9 |
Pages | e86965 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
prv-mir-LLT1 | MI0022072 | None | NC_006151.1 | 97878 | 97959 | + | - |
prv-mir-LLT2 | MI0022073 | None | NC_006151.1 | 98376 | 98455 | + | - |
prv-mir-LLT6 | MI0022077 | None | NC_006151.1 | 99540 | 99624 | + | - |
prv-mir-LLT7 | MI0022078 | None | NC_006151.1 | 99279 | 99385 | + | - |
prv-mir-LLT8 | MI0022079 | None | NC_006151.1 | 100211 | 100297 | + | - |
prv-mir-LLT9 | MI0022080 | None | NC_006151.1 | 100365 | 100444 | + | - |
prv-mir-LLT11a | MI0022083 | None | NC_006151.1 | 101960 | 102048 | + | - |
prv-mir-LLT11b | MI0022084 | None | NC_006151.1 | 142554 | 142642 | - | - |
prv-mir-LLT12 | MI0033053 | None | None | None | - | ||
ssc-mir-106a | MI0002412 | 20 | chrX | 126200183 | 126200263 | - | - |
ssc-mir-125b-2 | MI0002414 | 595 | None | None | - | ||
ssc-mir-23a | MI0002427 | 341 | chr2 | 65581838 | 65581907 | + | - |
ssc-mir-26a | MI0002429 | 1295 | chrUScaf3878 | 40640 | 40723 | + | - |
ssc-let-7i | MI0002447 | 995 | chr5 | 30021224 | 30021308 | + | - |
ssc-mir-21 | MI0002459 | 6294 | chr12 | 37340385 | 37340476 | + | High |
ssc-mir-9-1 | MI0002462 | 119 | chr4 | 102543210 | 102543298 | - | - |
ssc-mir-9-2 | MI0002463 | 119 | chr2 | 98744572 | 98744658 | - | - |
ssc-mir-99b | MI0007077 | 391 | chr6 | 51858217 | 51858286 | + | - |
ssc-mir-17 | MI0008214 | 201 | chr11 | 66610060 | 66610136 | + | - |
ssc-mir-133a-1 | MI0010681 | 33 | chr17 | 69274653 | 69274755 | - | - |
ssc-mir-30a | MI0010688 | 1861 | chr1 | 57750736 | 57750842 | - | High |
ssc-mir-206 | MI0013084 | 22 | chr7 | 52426445 | 52426524 | + | - |
ssc-mir-378-1 | MI0013088 | 42 | chr2 | 157640353 | 157640432 | + | - |
ssc-mir-133b | MI0013089 | 20 | chr7 | 52430290 | 52430369 | + | - |
ssc-mir-30d | MI0013091 | 1044 | chr4 | 6713518 | 6713596 | + | - |
ssc-mir-10a | MI0013101 | 71 | chr12 | 24791267 | 24791346 | - | - |
ssc-mir-99a | MI0013114 | 1671 | chr13 | 191558610 | 191558689 | + | High |
ssc-mir-345-1 | MI0013117 | 26 | chr7 | 128658300 | 128658379 | + | - |
ssc-mir-92a-2 | MI0013124 | 280 | chrX | 126199512 | 126199591 | - | - |
ssc-mir-92a-1 | MI0013125 | 718 | chr11 | 66610762 | 66610841 | + | - |
ssc-mir-92b | MI0013126 | 14 | chr4 | 103407102 | 103407181 | - | - |
ssc-mir-100 | MI0013128 | 992 | chr9 | 54383382 | 54383461 | - | - |
ssc-mir-450b | MI0013140 | 238 | chrUScaf3177 | 4358 | 4437 | + | - |
ssc-mir-1306 | MI0013148 | 14 | chr14 | 55110958 | 55111037 | + | - |
ssc-mir-339-1 | MI0013149 | 158 | chr3 | 726710 | 726789 | + | - |
ssc-mir-19b-2 | MI0013159 | 1107 | chrX | 126199650 | 126199729 | - | - |
ssc-mir-19b-1 | MI0013160 | 1155 | chr11 | 66610642 | 66610721 | + | - |
ssc-mir-129a | MI0013169 | 18 | chr2 | 20324630 | 20324709 | - | - |
ssc-mir-505 | MI0013171 | 103 | chrX | 130835642 | 130835721 | - | - |
ssc-mir-125b-1 | MI0013172 | 534 | chr9 | 54334908 | 54334987 | - | - |
ssc-mir-450c | MI0014776 | 169 | chrUScaf3177 | 4053 | 4133 | + | - |
ssc-mir-133a-2 | MI0015909 | 39 | chr6 | 99485213 | 99485285 | + | - |
ssc-mir-378-2 | MI0016622 | 38 | chr12 | 38396700 | 38396767 | + | - |
ssc-mir-218b | MI0017989 | 23 | chr16 | 59686628 | 59686711 | + | - |
ssc-let-7d | MI0022120 | 99 | chr3 | 44867267 | 44867362 | + | - |
ssc-mir-9-3 | MI0022123 | 127 | chr7 | 59924193 | 59924273 | + | - |
ssc-mir-29b-2 | MI0022126 | 60 | chr9 | 148552438 | 148552521 | + | - |
ssc-mir-137 | MI0022130 | 37 | chr4 | 131567078 | 131567159 | - | - |
ssc-mir-339-2 | MI0022144 | 399 | chr1 | 181756284 | 181756369 | - | - |
ssc-mir-345-2 | MI0022146 | 26 | None | None | - | ||
ssc-mir-1249-1 | MI0022158 | 6 | chr5 | 1499712 | 1499793 | + | - |
ssc-mir-1249-2 | MI0022159 | 6 | chrUScaf1993 | 9369 | 9450 | + | - |
ssc-mir-378b | MI0031641 | 9 | chr1 | 284932187 | 284932263 | - | - |
ssc-mir-26b | MI0033397 | 261 | chrUScaf756 | 56015 | 56079 | + | - |