Human hepatocellular carcinoma cell-specific miRNAs reveal the differential expression of miR-24 and miR-27a in cirrhotic/non-cirrhotic HCC |
|
|---|---|
| PubMed ID | 23229173 |
| Authors | Salvi A, Abeni E, Portolani N, Barlati S, De Petro G |
| Journal | Int J Oncol |
| Volume | 42 |
| Pages | 391-402 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| hsa-mir-1199 | MI0020340 | 0 | chr19 | 14073361 | 14073479 | + | - |
| ppy-mir-1199 | MI0020341 | None | chr19 | 14201751 | 14201869 | + | - |
| cfa-mir-1199 | MI0020342 | None | 20 | 48958649 | 48958767 | - | - |
| rno-mir-1199 | MI0020343 | 0 | chr19 | 25133394 | 25133513 | - | - |
| ptr-mir-1199 | MI0020344 | None | chr19 | 14865660 | 14865778 | + | - |
| hsa-let-7a-1 | MI0000060 | 46519 | chr9 | 94175957 | 94176036 | + | High |
| hsa-let-7a-2 | MI0000061 | 46265 | chr11 | 122146522 | 122146593 | - | High |
| hsa-let-7a-3 | MI0000062 | 46706 | chr22 | 46112749 | 46112822 | + | High |
| hsa-let-7b | MI0000063 | 27396 | chr22 | 46113686 | 46113768 | + | High |
| hsa-let-7c | MI0000064 | 15711 | chr21 | 16539828 | 16539911 | + | High |
| hsa-let-7d | MI0000065 | 4366 | chr9 | 94178834 | 94178920 | + | High |
| hsa-let-7e | MI0000066 | 5118 | chr19 | 51692786 | 51692864 | + | High |
| hsa-let-7f-1 | MI0000067 | 65280 | chr9 | 94176347 | 94176433 | + | High |
| hsa-let-7f-2 | MI0000068 | 65395 | chrX | 53557192 | 53557274 | - | High |
| hsa-mir-17 | MI0000071 | 12840 | chr13 | 91350605 | 91350688 | + | High |
| hsa-mir-19b-1 | MI0000074 | 12712 | chr13 | 91351192 | 91351278 | + | High |
| hsa-mir-19b-2 | MI0000075 | 12558 | chrX | 134169671 | 134169766 | - | High |
| hsa-mir-20a | MI0000076 | 6826 | chr13 | 91351065 | 91351135 | + | High |
| hsa-mir-21 | MI0000077 | 28570 | chr17 | 59841266 | 59841337 | + | High |
| hsa-mir-24-1 | MI0000080 | 2988 | chr9 | 95086021 | 95086088 | + | High |
| hsa-mir-24-2 | MI0000081 | 3119 | chr19 | 13836287 | 13836359 | - | High |
| hsa-mir-25 | MI0000082 | 3994 | chr7 | 100093560 | 100093643 | - | High |
| hsa-mir-27a | MI0000085 | 3484 | chr19 | 13836440 | 13836517 | - | High |
| hsa-mir-93 | MI0000095 | 1906 | chr7 | 100093768 | 100093847 | - | High |
| hsa-mir-29b-1 | MI0000105 | 2447 | chr7 | 130877459 | 130877539 | - | High |
| hsa-mir-29b-2 | MI0000107 | 2264 | chr1 | 207802443 | 207802523 | - | High |
| mmu-let-7g | MI0000137 | 17749 | 9 | 106056039 | 106056126 | + | High |
| mmu-let-7i | MI0000138 | 16255 | 10 | 122821545 | 122821629 | - | High |
| mmu-mir-29b-1 | MI0000143 | 2124 | 6 | 31039958 | 31040028 | - | High |
| mmu-mir-24-1 | MI0000231 | 10807 | 13 | 63449022 | 63449089 | + | High |
| mmu-mir-122 | MI0000256 | 6121 | 18 | 65381932 | 65381997 | + | High |
| hsa-mir-34a | MI0000268 | 442 | chr1 | 9151668 | 9151777 | - | High |
| mmu-mir-34c | MI0000403 | 41135 | 9 | 51014334 | 51014410 | - | High |
| mmu-mir-34b | MI0000404 | 3047 | 9 | 51014862 | 51014945 | - | High |
| mmu-let-7d | MI0000405 | 18752 | 13 | 48689488 | 48689590 | - | High |
| hsa-let-7g | MI0000433 | 6904 | chr3 | 52268278 | 52268361 | - | High |
| hsa-let-7i | MI0000434 | 7403 | chr12 | 62603686 | 62603769 | + | High |
| hsa-mir-122 | MI0000442 | 3777 | chr18 | 58451074 | 58451158 | + | High |
| mmu-mir-19b-2 | MI0000546 | 2410 | X | 51830860 | 51830943 | - | High |
| mmu-let-7a-1 | MI0000556 | 54921 | 13 | 48691655 | 48691748 | - | High |
| mmu-let-7a-2 | MI0000557 | 54880 | 9 | 41448012 | 41448107 | + | High |
| mmu-let-7b | MI0000558 | 17501 | 15 | 85591520 | 85591604 | + | High |
| mmu-let-7c-1 | MI0000559 | 47495 | 16 | 77396545 | 77396638 | + | High |
| mmu-let-7c-2 | MI0000560 | 47445 | 15 | 85590804 | 85590898 | + | High |
| mmu-let-7e | MI0000561 | 4644 | 17 | 18050614 | 18050706 | + | High |
| mmu-let-7f-1 | MI0000562 | 107727 | 13 | 48691305 | 48691393 | - | High |
| mmu-let-7f-2 | MI0000563 | 108671 | X | 150695342 | 150695424 | + | High |
| mmu-mir-20a | MI0000568 | 1950 | 14 | 115281589 | 115281695 | + | High |
| mmu-mir-21a | MI0000569 | 34902 | 11 | 86474893 | 86474984 | - | High |
| mmu-mir-24-2 | MI0000572 | 10986 | 8 | 84935444 | 84935550 | + | High |
| mmu-mir-27a | MI0000578 | 4457 | 8 | 84935301 | 84935387 | + | High |
| mmu-mir-93 | MI0000581 | 2058 | 5 | 138163785 | 138163872 | - | High |
| mmu-mir-34a | MI0000584 | 514 | 4 | 150152911 | 150153012 | + | High |
| mmu-mir-17 | MI0000687 | 2249 | 14 | 115281103 | 115281186 | + | High |
| mmu-mir-25 | MI0000689 | 8777 | 5 | 138163583 | 138163666 | - | High |
| mmu-mir-29b-2 | MI0000712 | 2042 | 1 | 194719348 | 194719428 | + | High |
| mmu-mir-19b-1 | MI0000718 | 2437 | 14 | 115281737 | 115281823 | + | High |
| hsa-mir-34b | MI0000742 | 437 | chr11 | 111512938 | 111513021 | + | High |
| hsa-mir-34c | MI0000743 | 1301 | chr11 | 111513439 | 111513515 | + | High |
| mmu-mir-1199 | MI0006307 | 14 | 8 | 84738144 | 84738262 | - | High |
| mmu-mir-21b | MI0021906 | 10 | 3 | 29690893 | 29691000 | + | - |
| mmu-let-7j | MI0021908 | 37 | 3 | 139734010 | 139734131 | + | - |
| mmu-mir-21c | MI0021932 | 8 | 8 | 129004629 | 129004706 | - | - |
| mmu-let-7k | MI0022352 | 67 | 5 | 147219999 | 147220108 | - | - |