Small RNA sequencing reveals miR-642a-3p as a novel adipocyte-specific microRNA and miR-30 as a key regulator of human adipogenesis |
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PubMed ID | 21767385 |
Authors | Zaragosi LE, Wdziekonski B, Brigand KL, Villageois P, Mari B, Waldmann R, Dani C, Barbry P |
Journal | Genome Biol |
Volume | 12 |
Pages | R64 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
hsa-mir-642a | MI0003657 | 75 | chr19 | 45674928 | 45675024 | + | High |
hsa-let-7a-1 | MI0000060 | 46519 | chr9 | 94175957 | 94176036 | + | High |
hsa-let-7a-2 | MI0000061 | 46265 | chr11 | 122146522 | 122146593 | - | High |
hsa-let-7a-3 | MI0000062 | 46706 | chr22 | 46112749 | 46112822 | + | High |
hsa-let-7b | MI0000063 | 27396 | chr22 | 46113686 | 46113768 | + | High |
hsa-let-7c | MI0000064 | 15711 | chr21 | 16539828 | 16539911 | + | High |
hsa-mir-17 | MI0000071 | 12840 | chr13 | 91350605 | 91350688 | + | High |
hsa-mir-21 | MI0000077 | 28570 | chr17 | 59841266 | 59841337 | + | High |
hsa-mir-22 | MI0000078 | 2726 | chr17 | 1713903 | 1713987 | - | High |
hsa-mir-27a | MI0000085 | 3484 | chr19 | 13836440 | 13836517 | - | High |
hsa-mir-29a | MI0000087 | 9609 | chr7 | 130876747 | 130876810 | - | High |
hsa-mir-30a | MI0000088 | 5468 | chr6 | 71403551 | 71403621 | - | High |
hsa-mir-29b-1 | MI0000105 | 2447 | chr7 | 130877459 | 130877539 | - | High |
hsa-mir-29b-2 | MI0000107 | 2264 | chr1 | 207802443 | 207802523 | - | High |
hsa-mir-103a-2 | MI0000108 | 15897 | chr20 | 3917494 | 3917571 | + | High |
hsa-mir-103a-1 | MI0000109 | 15862 | chr5 | 168560896 | 168560973 | - | High |
hsa-mir-30c-2 | MI0000254 | 1554 | chr6 | 71376960 | 71377031 | - | High |
hsa-mir-30d | MI0000255 | 2889 | chr8 | 134804876 | 134804945 | - | High |
hsa-mir-10b | MI0000267 | 3750 | chr2 | 176150303 | 176150412 | + | - |
hsa-mir-181a-2 | MI0000269 | 4211 | chr9 | 124692442 | 124692551 | + | High |
hsa-mir-204 | MI0000284 | 816 | chr9 | 70809975 | 70810084 | - | High |
hsa-mir-211 | MI0000287 | 1763 | chr15 | 31065032 | 31065141 | - | High |
hsa-mir-181a-1 | MI0000289 | 4186 | chr1 | 198859044 | 198859153 | - | High |
hsa-mir-27b | MI0000440 | 4618 | chr9 | 95085445 | 95085541 | + | High |
hsa-mir-30b | MI0000441 | 938 | chr8 | 134800520 | 134800607 | - | High |
hsa-mir-125b-1 | MI0000446 | 5007 | chr11 | 122099757 | 122099844 | - | High |
hsa-mir-133a-1 | MI0000450 | 680 | chr18 | 21825698 | 21825785 | - | High |
hsa-mir-133a-2 | MI0000451 | 684 | chr20 | 62564912 | 62565013 | + | High |
hsa-mir-135a-1 | MI0000452 | 227 | chr3 | 52294219 | 52294308 | - | High |
hsa-mir-135a-2 | MI0000453 | 262 | chr12 | 97563812 | 97563911 | + | High |
hsa-mir-143 | MI0000459 | 27646 | chr5 | 149428918 | 149429023 | + | High |
hsa-mir-125b-2 | MI0000470 | 5102 | chr21 | 16590237 | 16590325 | + | High |
hsa-mir-136 | MI0000475 | 338 | chr14 | 100884702 | 100884783 | + | High |
hsa-mir-154 | MI0000480 | 63 | chr14 | 101059755 | 101059838 | + | High |
hsa-mir-29c | MI0000735 | 2141 | chr1 | 207801852 | 207801939 | - | High |
hsa-mir-30c-1 | MI0000736 | 1532 | chr1 | 40757284 | 40757372 | + | High |
hsa-mir-30e | MI0000749 | 2874 | chr1 | 40754355 | 40754446 | + | High |
hsa-mir-378a | MI0000786 | 6859 | chr5 | 149732825 | 149732890 | + | High |
hsa-mir-135b | MI0000810 | 126 | chr1 | 205448302 | 205448398 | - | High |
hsa-mir-133b | MI0000822 | 266 | chr6 | 52148923 | 52149041 | + | - |
hsa-mir-345 | MI0000825 | 321 | chr14 | 100307859 | 100307956 | + | High |
hsa-mir-193b | MI0003137 | 1060 | chr16 | 14303967 | 14304049 | + | High |
hsa-mir-519b | MI0003151 | 19 | chr19 | 53695213 | 53695293 | + | High |
hsa-mir-664a | MI0006442 | 294 | chr1 | 220200538 | 220200619 | - | High |
hsa-mir-103b-1 | MI0007261 | 0 | chr5 | 168560904 | 168560965 | + | - |
hsa-mir-103b-2 | MI0007262 | 0 | chr20 | 3917502 | 3917563 | - | - |
hsa-mir-378b | MI0014154 | 37 | chr3 | 10330229 | 10330285 | + | - |
hsa-mir-378c | MI0015825 | 4181 | chr10 | 130962588 | 130962668 | - | - |
hsa-mir-642b | MI0016685 | 16 | chr19 | 45674932 | 45675008 | - | High |
hsa-mir-378d-2 | MI0003840 | 3410 | chr8 | 93916022 | 93916119 | - | - |
hsa-mir-378d-1 | MI0016749 | 3385 | chr4 | 5923275 | 5923328 | - | - |
hsa-mir-378e | MI0016750 | 246 | chr5 | 170028488 | 170028566 | + | - |
hsa-mir-378f | MI0016756 | 31 | chr1 | 23929070 | 23929147 | + | - |
hsa-mir-378g | MI0016761 | 30 | None | None | - | ||
hsa-mir-378h | MI0016808 | 4 | chr5 | 154829458 | 154829540 | + | - |
hsa-mir-378i | MI0016902 | 24 | chr22 | 41923222 | 41923297 | - | - |
hsa-mir-664b | MI0019134 | 82 | chrX | 154768596 | 154768656 | + | High |
hsa-mir-378j | MI0021273 | 1 | chr17 | 37614931 | 37615039 | - | - |