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MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana |
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|---|---|
| PubMed ID | 20042113 |
| Authors | Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H |
| Journal | BMC Genomics |
| Volume | 10 |
| Pages | 643 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| ath-MIR2933a | MI0013362 | None | chr1 | 11901409 | 11901520 | + | - |
| ath-MIR2933b | MI0013363 | None | chr3 | 17402762 | 17402873 | - | - |
| ath-MIR2934 | MI0013364 | None | chr3 | 5500032 | 5500152 | - | - |
| ath-MIR2936 | MI0013366 | None | chr4 | 1046804 | 1046983 | - | - |
| ath-MIR2937 | MI0013367 | None | chr5 | 13622416 | 13622838 | + | - |
| ath-MIR2938 | MI0013368 | None | chr5 | 22251822 | 22251921 | - | - |
| ath-MIR2939 | MI0013369 | None | chr5 | 19566960 | 19567084 | + | - |
| ath-MIR156a | MI0000178 | None | chr2 | 10676451 | 10676573 | - | - |
| ath-MIR156b | MI0000179 | None | chr4 | 15074899 | 15075081 | + | - |
| ath-MIR156c | MI0000180 | None | chr4 | 15415418 | 15415521 | - | - |
| ath-MIR156d | MI0000181 | None | chr5 | 3456632 | 3456749 | - | - |
| ath-MIR156e | MI0000182 | None | chr5 | 3867207 | 3867313 | + | - |
| ath-MIR156f | MI0000183 | None | chr5 | 9136106 | 9136237 | + | - |
| ath-MIR157a | MI0000184 | None | chr1 | 24913202 | 24913299 | - | - |
| ath-MIR157b | MI0000185 | None | chr1 | 24921086 | 24921217 | + | - |
| ath-MIR157c | MI0000186 | None | chr3 | 6244500 | 6244716 | - | - |
| ath-MIR157d | MI0000187 | None | chr1 | 18026811 | 18027031 | - | - |
| ath-MIR158a | MI0000188 | None | chr3 | 3366331 | 3366430 | - | - |
| ath-MIR159a | MI0000189 | None | chr1 | 27713233 | 27713416 | - | - |
| ath-MIR160a | MI0000190 | None | chr2 | 16340279 | 16340363 | + | - |
| ath-MIR160b | MI0000191 | None | chr4 | 9888982 | 9889070 | + | - |
| ath-MIR160c | MI0000192 | None | chr5 | 19009094 | 19009182 | - | - |
| ath-MIR161 | MI0000193 | None | chr1 | 17825685 | 17825857 | + | - |
| ath-MIR162a | MI0000194 | None | chr5 | 2634905 | 2635044 | - | - |
| ath-MIR162b | MI0000195 | None | chr5 | 7740598 | 7740708 | - | - |
| ath-MIR165a | MI0000199 | None | chr1 | 78927 | 79037 | - | - |
| ath-MIR165b | MI0000200 | None | chr4 | 369831 | 370012 | - | - |
| ath-MIR167a | MI0000208 | None | chr3 | 8108072 | 8108209 | + | - |
| ath-MIR167b | MI0000209 | None | chr3 | 23406168 | 23406276 | + | - |
| ath-MIR168a | MI0000210 | None | chr4 | 10578635 | 10578772 | + | - |
| ath-MIR168b | MI0000211 | None | chr5 | 18358788 | 18358911 | - | - |
| ath-MIR171a | MI0000214 | None | chr3 | 19073434 | 19073556 | + | - |
| ath-MIR172a | MI0000215 | None | chr2 | 11942914 | 11943015 | - | - |
| ath-MIR172b | MI0000216 | None | chr5 | 1188207 | 1188301 | - | - |
| ath-MIR173 | MI0000217 | None | chr3 | 8236153 | 8236254 | + | - |
| ath-MIR159b | MI0000218 | None | chr1 | 6220646 | 6220841 | + | - |
| ath-MIR319a | MI0000544 | None | chr4 | 12352956 | 12353131 | + | - |
| ath-MIR319b | MI0000545 | None | chr5 | 16660469 | 16660640 | - | - |
| ath-MIR167d | MI0000975 | None | chr1 | 11137539 | 11137915 | + | - |
| ath-MIR171b | MI0000989 | None | chr1 | 3961348 | 3961464 | - | - |
| ath-MIR172c | MI0000991 | None | chr3 | 3599776 | 3599908 | - | - |
| ath-MIR172d | MI0000992 | None | chr3 | 20587904 | 20588027 | + | - |
| ath-MIR390a | MI0001000 | None | chr2 | 16061954 | 16062060 | + | - |
| ath-MIR390b | MI0001001 | None | chr5 | 23636947 | 23637066 | + | - |
| ath-MIR396a | MI0001013 | None | chr2 | 4142323 | 4142473 | - | - |
| ath-MIR396b | MI0001014 | None | chr5 | 13611798 | 13611932 | + | - |
| ath-MIR399a | MI0001020 | None | chr1 | 10227073 | 10227195 | + | - |
| ath-MIR399b | MI0001021 | None | chr1 | 23345377 | 23345511 | - | - |
| ath-MIR399c | MI0001022 | None | chr5 | 24962485 | 24962598 | + | - |
| ath-MIR399d | MI0001023 | None | chr2 | 14442978 | 14443077 | - | - |
| ath-MIR399e | MI0001024 | None | chr2 | 14443504 | 14443612 | + | - |
| ath-MIR399f | MI0001025 | None | chr2 | 14444997 | 14445114 | + | - |
| ath-MIR402 | MI0001071 | None | chr1 | 29016520 | 29016828 | + | - |
| ath-MIR403 | MI0001072 | None | chr2 | 19415052 | 19415186 | + | - |
| ath-MIR156g | MI0001082 | None | chr2 | 8412516 | 8412618 | - | - |
| ath-MIR156h | MI0001083 | None | chr5 | 22597012 | 22597117 | - | - |
| ath-MIR158b | MI0001084 | None | chr1 | 20772218 | 20772302 | + | - |
| ath-MIR159c | MI0001085 | None | chr2 | 18994632 | 18994856 | + | - |
| ath-MIR319c | MI0001086 | None | chr2 | 17029701 | 17029899 | + | - |
| ath-MIR167c | MI0001088 | None | chr3 | 1306622 | 1306781 | - | - |
| ath-MIR172e | MI0001089 | None | chr5 | 23988472 | 23988596 | + | - |
| ath-MIR773a | MI0005103 | None | chr1 | 13067251 | 13067335 | + | - |
| ath-MIR774a | MI0005104 | None | chr1 | 22149936 | 22150033 | + | - |
| ath-MIR778 | MI0005108 | None | chr2 | 17349437 | 17349574 | - | - |
| ath-MIR827 | MI0005383 | None | chr3 | 22122760 | 22122936 | - | - |
| ath-MIR829 | MI0005385 | None | chr1 | 11834022 | 11834226 | - | - |
| ath-MIR845a | MI0005401 | None | chr4 | 12217406 | 12217568 | - | - |
| ath-MIR855 | MI0005411 | None | chr2 | 4674427 | 4674698 | + | - |
| ath-MIR854a | MI0005412 | None | chr5 | 11847719 | 11847939 | + | - |
| ath-MIR854b | MI0005413 | None | chr5 | 11324370 | 11324590 | - | - |
| ath-MIR854c | MI0005414 | None | chr5 | 11838096 | 11838316 | + | - |
| ath-MIR854d | MI0005415 | None | chr5 | 11689861 | 11690081 | - | - |
| ath-MIR859 | MI0005436 | None | chr1 | 22149718 | 22149843 | + | - |
| ath-MIR845b | MI0005444 | None | chr4 | 12214069 | 12214167 | - | - |
| ath-MIR773b | MI0014666 | None | chr1 | 13050667 | 13050864 | - | - |
| ath-MIR774b | MI0014668 | None | chr1 | 22150128 | 22150266 | + | - |
| ath-MIR854e | MI0015956 | None | chr5 | 11942467 | 11942687 | + | - |
| ath-MIR156i | MI0019232 | None | chr1 | 19806917 | 19807113 | - | - |
| ath-MIR156j | MI0019234 | None | chr2 | 17589020 | 17589087 | - | - |