miRBase entry: 16766679

Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes

PubMed ID 16766679
Authors "Watanabe T, Takeda A, Tsukiyama T, Mise K, Okuno T, Sasaki H, Minami N, Imai H"
Journal "Genes Dev
Volume 20
Pages 1732-1743

There are 167 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
mmu-let-7g MI0000137 17749 9 106056039 106056126 + High
mmu-let-7i MI0000138 16255 10 122821545 122821629 - High
mmu-mir-15b MI0000140 1511 3 68917105 68917168 + High
mmu-mir-30a MI0000144 6204 1 23311350 23311420 + High
mmu-mir-99a MI0000146 1842 16 77395824 77395888 + High
mmu-mir-99b MI0000147 3161 17 18050450 18050519 + High
mmu-mir-125b-2 MI0000152 10671 16 77443161 77443231 + High
mmu-mir-126a MI0000153 6917 2 26481369 26481441 + High
mmu-mir-127 MI0000154 6751 12 109559280 109559349 + High
mmu-mir-130a MI0000156 1739 2 84571459 84571522 - High
mmu-mir-140 MI0000165 17279 8 108277876 108277945 + High
mmu-mir-152 MI0000174 2208 11 96741219 96741291 + High
mmu-mir-24-1 MI0000231 10807 13 63449022 63449089 + High
mmu-mir-191 MI0000233 12102 9 108445518 108445591 + High
mmu-mir-202 MI0000245 1967 7 139537602 139537673 - High
mmu-mir-204 MI0000247 259 19 22727969 22728036 + High
mmu-mir-143 MI0000257 19717 18 61782267 61782329 - High
mmu-mir-30e MI0000259 4788 4 120629803 120629894 - High
mmu-mir-34c MI0000403 41135 9 51014334 51014410 - High
mmu-let-7d MI0000405 18752 13 48689488 48689590 - High
mmu-mir-30c-1 MI0000547 1771 4 120626731 120626819 - High
mmu-mir-30c-2 MI0000548 1771 1 23330782 23330865 + High
mmu-mir-30d MI0000549 4620 15 68213057 68213138 - High
mmu-let-7a-1 MI0000556 54921 13 48691655 48691748 - High
mmu-let-7a-2 MI0000557 54880 9 41448012 41448107 + High
mmu-let-7b MI0000558 17501 15 85591520 85591604 + High
mmu-let-7c-1 MI0000559 47495 16 77396545 77396638 + High
mmu-let-7c-2 MI0000560 47445 15 85590804 85590898 + High
mmu-let-7e MI0000561 4644 17 18050614 18050706 + High
mmu-let-7f-1 MI0000562 107727 13 48691305 48691393 - High
mmu-let-7f-2 MI0000563 108671 X 150695342 150695424 + High
mmu-mir-15a MI0000564 1860 14 61869476 61869559 - High
mmu-mir-21a MI0000569 34902 11 86474893 86474984 - High
mmu-mir-24-2 MI0000572 10986 8 84935444 84935550 + High
mmu-mir-26a-1 MI0000573 8928 9 118860864 118860953 + High
mmu-mir-26b MI0000575 2699 1 74433469 74433553 + High
mmu-mir-29a MI0000576 13408 6 31039595 31039682 - High
mmu-mir-92a-2 MI0000580 9532 X 51830715 51830805 - High
mmu-mir-103-1 MI0000587 16701 11 35673223 35673308 + High
mmu-mir-103-2 MI0000588 16710 2 131129972 131130057 + High
rno-mir-322-1 MI0000589 370 chrX 158148161 158148255 + High
mmu-mir-322 MI0000590 4232 X 52143132 52143226 - High
rno-mir-301a MI0000593 366 chr10 74417746 74417845 + High
rno-mir-324 MI0000594 60 chr10 56621126 56621208 + High
rno-let-7d MI0000601 1221 chr17 16419980 16420077 + High
rno-mir-140 MI0000611 1790 chr19 39608951 39609049 + High
rno-mir-338 MI0000618 936 chr10 109195251 109195316 - High
rno-mir-342 MI0000626 114 chr6 132561169 132561267 + High
rno-mir-345 MI0000631 1116 chr6 132748968 132749063 + High
rno-mir-20a MI0000638 85 chr15 100180334 100180418 + High
rno-mir-351-1 MI0000642 1104 chrX 158149206 158149286 + High
rno-mir-151 MI0000647 1996 chr7 114485547 114485643 - High
rno-mir-101b MI0000648 1821 chr1 247263723 247263819 + High
mmu-mir-107 MI0000684 15027 19 34798087 34798173 - High
mmu-mir-320 MI0000704 3881 14 70680950 70681031 + High
mmu-mir-26a-2 MI0000706 8956 10 126831399 126831482 + High
mmu-mir-92a-1 MI0000719 11693 14 115281859 115281938 + High
mmu-mir-181b-1 MI0000723 2023 1 137894377 137894456 + High
mmu-mir-181c MI0000724 830 8 84905502 84905590 - High
mmu-mir-125b-1 MI0000725 11761 9 41493222 41493298 + High
mmu-mir-379 MI0000796 1971 12 109675494 109675559 + High
mmu-mir-181b-2 MI0000823 2033 2 38743842 38743930 + High
rno-let-7a-1 MI0000827 3545 chr17 16417853 16417946 + High
rno-let-7a-2 MI0000828 3492 chr8 45753264 45753359 + High
rno-let-7b MI0000829 1369 chr7 126590627 126590711 + High
rno-let-7c-1 MI0000830 4658 chr11 16052873 16052966 + High
rno-let-7c-2 MI0000831 5130 chr7 126590212 126590306 + High
rno-let-7e MI0000832 454 chr1 59704381 59704473 + High
rno-let-7f-1 MI0000833 10069 chr17 16418221 16418309 + High
rno-let-7f-2 MI0000834 9992 chrX 21583272 21583354 + High
rno-let-7i MI0000835 3479 chr7 66802731 66802815 + High
rno-mir-10a MI0000841 52722 chr10 84165950 84166059 + High
rno-mir-10b MI0000842 56538 chr3 61647978 61648086 + High
rno-mir-15b MI0000843 86 chr2 165605923 165606020 + High
rno-mir-16-1 MI0000844 5307 chr2 165606072 165606166 + High
rno-mir-19b-1 MI0000847 189 chr15 100180464 100180550 + High
rno-mir-19b-2 MI0000848 177 chrX 140117379 140117474 - -
rno-mir-21 MI0000850 8269 chr10 73902210 73902301 - High
rno-mir-22 MI0000851 83171 chr10 62299592 62299686 + High
rno-mir-23a MI0000852 1039 chr19 25318582 25318656 + High
rno-mir-23b MI0000853 618 chr17 823222 823318 + High
rno-mir-24-1 MI0000854 268 chr17 823968 824035 + High
rno-mir-24-2 MI0000855 382 chr19 25318863 25318970 + High
rno-mir-25 MI0000856 1074 chr12 19307340 19307423 - High
rno-mir-26a-1 MI0000857 34513 chr8 127714441 127714530 + High
rno-mir-26b MI0000858 2546 chr9 81675275 81675359 + High
rno-mir-27b MI0000859 15163 chr17 823461 823557 + High
rno-mir-27a MI0000860 870 chr19 25318736 25318822 + High
rno-mir-28 MI0000861 717 chr11 79380523 79380608 - High
rno-mir-29b-2 MI0000862 138 chr1 38238376 38238456 + High
rno-mir-29a MI0000863 2090 chr4 58343931 58344018 - High
rno-mir-29b-1 MI0000864 127 chr4 58344310 58344390 - High
rno-mir-29c-1 MI0000865 334 chr1 38238904 38238991 + High
rno-mir-30c-1 MI0000866 4890 chr5 139699877 139699965 - High
rno-mir-30e MI0000867 10150 chr5 139702872 139702963 - High
rno-mir-30b MI0000868 1054 None None High
rno-mir-30d MI0000869 10717 chr7 109286463 109286544 - High
rno-mir-30a MI0000870 29417 chr9 29542635 29542705 + High
rno-mir-30c-2 MI0000871 4454 chr9 29562376 29562459 + High
rno-mir-32 MI0000873 35 chr5 73934255 73934324 - High
rno-mir-33 MI0000874 42 chr7 123431612 123431680 + High
rno-mir-92a-1 MI0000878 3617 chr15 100180586 100180663 + High
rno-mir-92a-2 MI0000879 409 chrX 140117249 140117340 - -
rno-mir-96 MI0000881 61 chr4 57463366 57463471 - -
rno-mir-98 MI0000882 359 chrX 21583875 21583982 + High
rno-mir-99a MI0000883 872 chr11 16052153 16052233 + High
rno-mir-99b MI0000884 3683 chr1 59704216 59704285 + High
rno-mir-101a MI0000886 2456 chr5 120168437 120168511 - High
rno-mir-103-2 MI0000887 1247 chr3 123833671 123833756 + High
rno-mir-103-1 MI0000888 1240 chr10 20606715 20606800 + High
rno-mir-106b MI0000889 112 chr12 19307752 19307833 - High
rno-mir-125a MI0000895 4841 chr1 59704827 59704911 + High
rno-mir-125b-1 MI0000896 4540 chr8 45798260 45798346 + High
rno-mir-125b-2 MI0000897 3253 chr11 16097346 16097433 + High
rno-mir-126a MI0000898 5265 chr3 4042488 4042560 + High
rno-mir-130a MI0000903 353 chr3 72141037 72141124 - High
rno-mir-130b MI0000904 72 chr11 88129773 88129854 + High
rno-mir-139 MI0000913 131 chr1 166589545 166589612 + High
rno-mir-142 MI0000915 1356 chr10 75050839 75050925 + High
rno-mir-143 MI0000916 88004 chr18 56971273 56971377 - High
rno-mir-145 MI0000918 1125 chr18 56969907 56969994 - High
rno-mir-146a MI0000919 3964 chr10 28962476 28962570 - High
rno-mir-150 MI0000920 485 chr1 101115974 101116058 + High
rno-mir-183 MI0000928 834 chr4 57463569 57463678 - High
rno-mir-185 MI0000930 1155 chr11 86812702 86812781 + High
rno-mir-186 MI0000931 1969 chr2 263873759 263873844 + High
rno-mir-191a MI0000934 15419 chr8 117354364 117354454 + High
rno-mir-192 MI0000935 35899 chr1 221634971 221635080 + High
rno-mir-193a MI0000936 130 chr10 67065896 67065981 + High
rno-mir-194-1 MI0000937 2147 chr13 103250576 103250658 + High
rno-mir-194-2 MI0000938 1967 chr1 221634786 221634870 + High
rno-mir-195 MI0000939 1360 chr10 56845301 56845387 + High
rno-mir-196a MI0000940 162 chr7 144584235 144584344 + High
rno-mir-199a MI0000941 1079 chr13 80125487 80125596 + High
rno-mir-200a MI0000943 690 chr5 173489366 173489454 - High
rno-mir-200b MI0000944 904 chr5 173490144 173490238 - High
rno-mir-203a MI0000945 655 chr6 136704961 136705057 + High
rno-mir-206 MI0000948 204 chr9 26791764 26791847 + High
rno-mir-210 MI0000950 90 chr1 214208355 214208464 - High
rno-mir-214 MI0000954 84 chr13 80130905 80131014 + High
rno-mir-218a-2 MI0000957 311 chr10 20428661 20428770 + High
rno-mir-218a-1 MI0000958 310 chr14 66923083 66923192 - Medium
rno-mir-223 MI0000963 231 chrX 65367812 65367921 + High
rno-mir-429 MI0001643 666 chr5 173488331 173488415 - -
rno-mir-451 MI0001731 441 chr10 65291204 65291275 - High
mmu-mir-465a MI0002400 3971 X 65882658 65882731 - High
mmu-mir-470 MI0002405 4587 X 65857557 65857631 - High
mmu-mir-471 MI0002406 985 X 65836201 65836267 - High
mmu-mir-20b MI0003536 135 X 51830990 51831069 - High
mmu-mir-503 MI0003538 1690 X 52142861 52142931 - High
rno-mir-382 MI0003548 5035 chr6 133884178 133884257 + High
rno-mir-374 MI0003552 68 chrX 74443648 74443715 - High
rno-mir-378a MI0003719 9439 chr18 56726150 56726214 - High
rno-mir-505 MI0003720 49 chrX 143517014 143517080 - High
rno-mir-499 MI0003721 166 chr3 151138862 151138926 + High
rno-mir-664-1 MI0003722 36 chr18 47488028 47488086 + -
rno-mir-664-2 MI0003723 58 chr13 103192581 103192639 + High
rno-mir-497 MI0003724 426 chr10 56844977 56845045 + High
mmu-mir-744 MI0004124 1669 11 65625559 65625658 - High
mmu-mir-741 MI0005205 5221 X 65840411 65840481 - High
mmu-mir-742 MI0005206 486 X 65823979 65824043 - High
mmu-mir-743a MI0005207 4666 X 65820363 65820424 - High
mmu-mir-181d MI0005450 754 8 84905345 84905416 - High
rno-mir-29c-2 MI0031761 334 chr13 113782585 113782672 + High
rno-mir-322-2 MI0031763 370 chrX 158584542 158584636 + High
rno-mir-351-2 MI0031766 1104 chrX 158585587 158585667 + High
rno-mir-29b-3 MI0031777 138 chr13 113782057 113782137 + High



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